FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830710

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830710
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14263434
Sequences flagged as poor quality0
Sequence length52-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC396600.07.8812957120
GTGGTCG363500.07.856248120
TGGTCGC333050.07.385622120
ATCTCGG556350.07.214241120
GGTCGCC340250.07.176438120
CTCGGTG499450.07.1592393120
TAGATCT605700.07.0622745120
GATCTCG597800.07.055244120
TCGGTGG457700.07.038919120
AAAAAAA878600.07.026464120
AGATCTC591400.06.938861118-119
GAGTGTA809450.06.796603120
AGTGTAG766600.06.777378120
CGGTGGT447050.06.7704644118-119
TCTCGGT518650.06.720698120
CGTATCA235850.06.715536120
CGCCGTA335050.06.4104133120
GTAGATC764050.06.368127120
AGAGTGT862200.06.2833657120
GTGTAGA752150.06.1577983120
Produced by FastQC (version 0.11.5)