FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15812251
Sequences flagged as poor quality0
Sequence length50-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG92550.015.429231120
AAAAAAA1243550.012.105456120
TCTCGGG46650.09.003059120
TGGTCGC851150.08.719817120
CGTATCA560700.08.646186120
TCATTAA434050.08.280008120
CGCCGTA682000.08.164082120
GTATCAT556150.08.155932120
GTGGTCG921600.08.137879120
GGTGGTC1000300.07.905492120
CATTAAA435200.07.872107120
CCGTATC650000.07.753712120
GCCGTAT661500.07.709617120
GTCGCCG790350.07.591442120
TATCATT601650.07.569054120
GGTCGCC809800.07.5647006120
TCGCCGT752500.07.534754120
CGGTGGT1106050.07.3612037120
TCGGTGG1155500.07.326572120
ATCATTA501050.07.3045335120
Produced by FastQC (version 0.11.5)