FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11758152
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA773950.010.945517120
CGTATCA325300.08.797287120
GCGTCGG83600.08.539947120
GCCGTAT405650.08.341459120
GGTCGCC485100.08.323352120
TGGTCGC499250.08.303753120
TCATTAA262550.08.272009120
CCGTATC379250.08.162788120
CGCCGTA445250.08.098135120
GTATCAT334900.07.953939120
GTGGTCG540450.07.9038534120
ATCATTA306500.07.888401120
CGGTGGT664800.07.7520504120
TCGCCGT503500.07.435318120
GTCGCCG509150.07.4235086120
TCGGTGG682950.07.387909120
GGTGGTC592850.07.1748996120
CTCGGTG734100.07.1100845118-119
TATCATT369400.06.8700185120
CATTAAA281500.06.8413386120
Produced by FastQC (version 0.11.5)