FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16188108
Sequences flagged as poor quality0
Sequence length55-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG92650.012.239445120
GGTCGCC245000.09.11008120
GTGGTCG267200.08.847185120
TCGGTGG359850.08.436734120
ATCTCGG442900.08.399074120
TGGTCGC247750.08.28275118-119
GGTGGTC303600.08.260757120
CTCGGTG389400.08.181707120
GTAGATC666800.08.161257120
AGATCTC509850.08.1199255120
TAGATCT514800.08.111778120
GAGTGTA733000.08.070831120
AGTGTAG683150.08.036193120
TCTCGGT400000.08.0098915120
CGGTGGT355750.07.9268074120
GATCTCG491400.07.8875604120
GTGTAGA667250.07.7601047120
AGAGTGT793300.07.487608120
AAGAGTG870200.07.322355120
TGTAGAT731550.07.119034120
Produced by FastQC (version 0.11.5)