FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830726

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830726
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15007758
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1891150.013.491351120
GCGTCGG107400.012.123935120
CGTATCA836850.09.178052120
TCATTAA653550.09.107958120
TCTCGGG45350.08.997457120
GTATCAT822450.08.95936120
CCCCTCA24650.08.7673661
CATTAAA644150.08.616737120
GCCGTAT1004350.08.537589120
ATCATTA737750.08.442601120
CCCCCCA8658.003866E-58.3281541
CGCCGTA1067650.08.228114120
CCGTATC928900.08.191029120
GGTCGCC1270700.08.037198120
TATCATT850250.07.9465737120
TGGTCGC1339100.07.837272120
GTCGCCG1246950.07.7235007120
TCGCCGT1177350.07.543003120
GGTGGTC1531800.07.5133686120
GTGGTCG1432100.07.5043035120
Produced by FastQC (version 0.11.5)