FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830728

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830728
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7854041
Sequences flagged as poor quality0
Sequence length66-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC10650.027.0432051
CCCCCCT9451.6916601E-1011.4289731
TCTCGGT171700.010.587193120
ATCTCGG191700.010.515396120
AGTGTAG316700.010.134778120
TAGATCT224850.010.0857315120
AGATCTC220850.010.051082120
CCCCCCA9051.3624776E-79.9451011
TGGTCGC103600.09.439225120
GTGTAGA305750.09.359667120
CTCGGTG165150.09.336046120
GGGGCCC6604.2869314E-49.09093952
GTGGTCG114650.09.05275120
GAGTGTA342800.09.013114120
AGAGTGT375100.08.924741120
GATCTCG225950.08.92145120
AAGAGTG416850.08.779272120
GTAGATC314550.08.716357120
GGTGGTC128200.08.704291120
TGTAGAT325550.08.384983120
Produced by FastQC (version 0.11.5)