FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12014741
Sequences flagged as poor quality0
Sequence length51-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1010000.09.73657120
TGGTCGC474550.08.509058120
CGTATCA311500.08.282451120
GGTGGTC556600.07.869155120
CCGTATC368950.07.757098120
GTGGTCG514400.07.5932627120
GGTCGCC464550.07.5556498120
GTATCAT339350.07.4966364120
TCGGTGG635450.07.232623120
GCCGTAT385550.07.127433118-119
CTCGGTG684450.07.1093116120
GTCGCCG495850.07.102908120
CGCCGTA414000.06.999954120
TCTCGGT714450.06.894769120
CGGTGGT611800.06.8845577120
ATCTCGG768700.06.7594204120
GATCTCG826550.06.6638002120
TCGCCGT479550.06.6311736120
AGATCTC838150.06.628842120
TAGATCT871550.06.5951037120
Produced by FastQC (version 0.11.5)