FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12933637
Sequences flagged as poor quality0
Sequence length55-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG58200.012.06326120
TGGTCGC233750.09.729475120
GATCTCG443950.09.353493120
AGATCTC468750.09.02505120
TCTCGGT384400.08.929239120
TAGATCT489350.08.816803120
GTGGTCG257250.08.747375120
ATCTCGG420550.08.675365120
GGTGGTC294700.08.653875120
AGTGTAG674900.08.562265120
GGTCGCC227750.08.510321120
TCGGTGG352200.08.416653120
GTGTAGA649200.08.291169120
GTAGATC663950.08.152165120
CTCGGTG358100.08.143925120
GTCGCCG239700.07.9859114120
GAGTGTA726700.07.97671120
AGAGTGT784950.07.9351873120
TGTAGAT680650.07.546607120
AAGAGTG861650.07.4795456120
Produced by FastQC (version 0.11.5)