FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13180707
Sequences flagged as poor quality0
Sequence length59-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT212450.09.828271120
AGTGTAG301750.08.828569120
GTAGATC296150.08.630829120
GAGTGTA324850.08.367004120
TAGGGAA548300.08.1525345120
GATCTCG214550.08.026164120
AGATCTC214450.08.001928120
TGTAGGG615150.07.793282120
ATCTCGG202450.07.705667120
AGAGTGT360900.07.664233120
GTGTAGA306100.07.6054173120
GTAGGGA574500.07.519641120
TCTCGGT187000.07.4759946120
CTCGGTG187650.07.1303515120
GGTGGTC145500.07.0928392120
AAGAGTG407200.07.058012120
TCGGTGG178600.07.0549264120
GTCGTGT779650.06.933935120
GTGTAGG668850.06.916403120
TCGTGTA744450.06.9152265120
Produced by FastQC (version 0.11.5)