FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12552037
Sequences flagged as poor quality0
Sequence length50-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1016050.013.261105120
GCGTCGG106750.09.614057120
CGTATCA445850.09.382584120
TCATTAA363150.08.858439120
CCGTATC521100.08.707212120
TGGTCGC744750.08.598692120
GTATCAT445450.08.596073120
GCCGTAT554550.08.506683120
CGCCGTA606100.08.397114120
ATCATTA410650.08.155315120
CATTAAA357050.08.102078120
GGTCGCC716900.08.003459120
GTGGTCG804600.07.9590783120
TATCATT479700.07.8446984120
GGTGGTC870350.07.743981120
GTCGCCG732000.07.5923867120
TCGGTGG986800.07.5782228120
TCGCCGT685250.07.435961120
CGGTGGT947700.07.4159102120
TCTCGGT1106100.07.064721120
Produced by FastQC (version 0.11.5)