FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830758

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830758
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14658531
Sequences flagged as poor quality0
Sequence length68-126
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT540800.09.41846120
TCGGTGG391800.09.187465120
GAGTGTA802250.09.056144120
AGAGTGT877700.09.036375120
AGATCTC529850.09.00167120
GCGTCGG126200.08.98486120
TCTCGGT437350.08.93019120
AGTGTAG738750.08.892533120
GTGGTCG297450.08.874576120
GTGTAGA714200.08.769797120
TGTAGAT726050.08.676242120
TGGTCGC267800.08.468181120
GATCTCG546200.08.347776120
GTAGATC759850.08.321883120
AAGAGTG955400.08.244956120
GGTGGTC346800.08.130695120
CTCGGTG444300.08.101843120
ATCTCGG484500.08.036368120
TAGGGAA1412200.07.901793120
CGGTGGT394800.07.628435120
Produced by FastQC (version 0.11.5)