FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11309035
Sequences flagged as poor quality0
Sequence length83-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGTGTA121350.010.233374120
AGTGTAG115800.09.687714120
GTAGGGA244250.09.407029120
TAGATCT85150.09.1589775120
GTGTAGG299200.08.862351120
AAGAGTG166100.08.81269120
TGTAGGG276250.08.686523120
CGTGTAG314450.08.680566120
TCGTGTA341250.08.614136120
TAGGGAA233850.08.5940075120
AGAGTGT137150.08.551439118-119
GTCGTGT359850.08.318927120
AGATCTC101550.08.211512120
CGTCGTG409800.08.110098120
AGCGTCG459600.08.079767120
GAGCGTC504300.07.958394120
GTAGATC133500.07.594404118-119
GTGTAGA127950.07.40807120
GCGTCGT435450.07.398169118-119
AAGAGCG599950.07.319548120
Produced by FastQC (version 0.11.5)