FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830762

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830762
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11699186
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1431300.015.119614120
CGTATCA632350.09.516311120
TCATTAA484500.09.4359665120
CATTAAA460950.09.345355120
GCCGTAT763300.09.070595120
ATCATTA550150.09.051534120
GTATCAT612850.09.035928120
CCGTATC712400.08.969143120
CGCCGTA814600.08.926545120
TATCATT623950.08.538633120
TGGTCGC1039250.08.157317120
GGTCGCC986250.08.139436120
GTCGCCG951100.07.9355974120
GGTGGTC1199250.07.9194746120
TCGCCGT901750.07.9010487118-119
GTGGTCG1117600.07.8001766120
ATTAAAA521750.07.7963696120
GCGTCGG71050.07.5998254120
TCGGTGG1373100.07.270702120
CGGTGGT1298750.07.248073120
Produced by FastQC (version 0.11.5)