FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11999875
Sequences flagged as poor quality0
Sequence length56-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1039600.014.547796120
TCATTAA358450.010.092049120
CGTATCA499800.09.90258120
ATCATTA408800.09.714888120
CATTAAA351400.09.679924120
CCGTATC562000.09.254936120
GCCGTAT620250.09.246593120
GTATCAT483550.09.056745120
GCGTCGG98850.08.982055120
TATCATT475800.08.80079120
CGCCGTA654600.08.5414295120
CGATCTA12702.7892384E-88.5039915
TCGCCGT756900.08.449079120
TGGTCGC834450.08.4475120
GTGGTCG909550.08.079791120
GTCGCCG807000.08.065789120
GGTCGCC801000.08.058801118-119
ATTAAAA392800.07.8807745120
GGTGGTC967600.07.4617534118-119
TTAAAAA388850.07.235714120
Produced by FastQC (version 0.11.5)