FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830770

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830770
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12197555
Sequences flagged as poor quality0
Sequence length55-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG57250.011.319094120
TGGTCGC211300.09.086861120
GTGGTCG233950.08.976527120
TAGATCT409100.08.814716120
GGTCGCC205600.08.580006120
GATCTCG388600.08.306974120
TCGGTGG313000.07.917154120
AGTGTAG549800.07.846708120
GGTGGTC265700.07.7909584120
GTGTAGA541050.07.7629004120
CTCGGTG326750.07.7125335120
ATCTCGG368950.07.676051120
TCTCGGT343000.07.592048120
AGATCTC397200.07.590877118-119
AGAGTGT637250.07.579654120
GTAGATC525350.07.5494633120
GAGTGTA593400.07.4724026120
TGTAGAT556200.07.0660005120
CGCCGTA199050.07.0537004120
CGGTGGT317550.07.0290103120
Produced by FastQC (version 0.11.5)