FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13108748
Sequences flagged as poor quality0
Sequence length53-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC239950.09.0317545120
GTGTAGA332550.08.845549120
AGTGTAG337850.08.369175120
GAGTGTA368150.08.300011120
TAGATCT240450.08.296515118-119
AGAGTGT400150.08.296368120
GTAGATC334650.08.2698145120
TCTCGGT209100.08.067482120
TAGGGAA642200.07.8148685120
GATCTCG234800.07.695806120
GTAGGGA668200.07.6455503120
TGGTCGC140450.07.394521120
ATCTCGG222700.07.3682775118-119
CTCGGTG203750.07.30701120
TGTAGGG710100.07.304322120
GCGTCGG76200.07.2480054120
AAGAGTG453900.07.181668120
GTGGTCG158850.07.180456120
TGTAGAT377750.07.0560904120
GGTGGTC174000.07.038281120
Produced by FastQC (version 0.11.5)