FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830780

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830780
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17168264
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG84150.015.899994120
AAAAAAA988450.09.536032120
GGTCGCC554450.08.256735120
CTCGGTG819450.08.178561120
TGGTCGC574950.08.15018120
GTGGTCG619050.08.063874120
GGTGGTC672700.08.027259120
GTCGCCG537850.07.976109120
GCCGTAT502550.07.7842097120
TCGGTGG799250.07.6796103120
CGCCGTA480050.07.674301118-119
ATCTCGG944150.07.4860115120
TCTCGGT877050.07.3609543120
CGGTGGT766000.07.33934120
TAGATCT1085000.07.3105135120
CGTATCA432350.07.2995563120
AGATCTC1029300.07.2572746120
TCGCCGT519150.07.2117043120
GATCTCG982150.07.135283120
TCATTAA355750.06.98235120
Produced by FastQC (version 0.11.5)