FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14122256
Sequences flagged as poor quality0
Sequence length57-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG105950.011.948851120
TAGATCT639400.09.477491120
GGTGGTC377700.09.340605120
AGATCTC608200.08.987038120
TCGGTGG458150.08.800477120
ATCTCGG563150.08.800363120
TCTCGGT517850.08.75916120
GTGTAGA847750.08.740651120
GGTCGCC315550.08.708471120
GTAGATC827250.08.638128120
AGTGTAG886350.08.63754120
GATCTCG591850.08.505404120
CTCGGTG485000.08.486469120
TGGTCGC308250.08.408631118-119
GTGGTCG346250.08.265578120
AGAGTGT1035050.08.219768120
GAGTGTA956300.07.993186120
TGTAGAT850500.07.957551120
CGGTGGT439550.07.917067120
AAGAGTG1130400.07.659119120
Produced by FastQC (version 0.11.5)