FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830796

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830796
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19282884
Sequences flagged as poor quality0
Sequence length51-126
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGGG36500.020.218958120
AAAAAAA7731500.014.873539120
CGGTGGG38700.013.178152120
CCGATCT64450.011.8223784
GCGTCGG103600.011.6408120
TCCGATC77900.010.9364143
CTTCCGA134800.09.6581491
TCATTAA2493550.08.715191120
CATTAAA2351150.08.671407120
ATCATTA2710150.08.527849120
CGATCTA22050.08.4348465
GTATCAT2999700.08.228734120
TATCATT2955050.08.024143120
ATTAAAA2528300.07.9665313120
CGTATCA3137300.07.8487024120
TAAAAAA2409850.07.8228087120
TTAAAAA2438750.07.7547083120
CCGTATC3373500.07.724239120
GCCGTAT3579650.07.4838905120
AAAGAGG205500.07.299191120
Produced by FastQC (version 0.11.5)