FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13866202
Sequences flagged as poor quality0
Sequence length50-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA849450.011.5280075120
GGTGGTC666750.08.667953120
CGTATCA356400.08.630515120
GTGGTCG621200.08.616894120
TGGTCGC566900.08.435505120
CCGTATC410400.08.153654120
GGTCGCC556300.08.142669120
CGCCGTA477100.08.071479120
CGGTGGT745900.07.9253592120
GCCGTAT456550.07.790006120
TCATTAA289950.07.707691120
ATCATTA337600.07.7053065120
TCTCGGT874950.07.6284323120
CTCGGTG840400.07.5989165120
GTATCAT359150.07.5942426120
CGATCTA13506.6749635E-77.55547485
TCGGTGG782650.07.55502118-119
TCGCCGT570800.07.5253477120
GATCTCG980150.07.434859120
AGATCTC1014150.07.304077120
Produced by FastQC (version 0.11.5)