FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11998416
Sequences flagged as poor quality0
Sequence length59-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG62500.08.735208120
GGTCGCC209750.08.437852120
GGTGGTC261200.08.268775120
TGGTCGC212450.08.175317118-119
TAGATCT419300.08.012628120
CTCGGTG323350.07.922584120
TCGGTGG309900.07.879246120
GTGGTCG230400.07.8638697120
TCTCGGT341250.07.8234663120
ATCTCGG369900.07.8014007120
AGATCTC417150.07.7806683120
AGTGTAG548100.07.596465120
GTCGCCG221000.07.4382396120
CGGTGGT302100.07.3280344120
TGTAGAT572050.07.288912120
AGAGTGT628900.07.173781120
GTGTAGA537500.07.1323915118-119
GAGTGTA582600.07.11573120
GTAGATC528150.07.0996113120
GATCTCG403550.07.0170813120
Produced by FastQC (version 0.11.5)