FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830814

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830814
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18313206
Sequences flagged as poor quality0
Sequence length75-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG281300.08.470094120
TGGTCGC260300.08.438677120
CTCGGTG400000.08.057156120
GGTGGTC311800.08.04577120
TAGATCT490100.07.9596887120
GTGTAGA633600.07.738813120
TCGGTGG363800.07.6875978120
GATCTCG482000.07.6701016120
AGATCTC484650.07.640546120
GTAGATC648800.07.5945106120
TCTCGGT405450.07.475178120
ATCTCGG447250.07.447492120
AAGAGTG807050.07.406727120
AGAGTGT731850.07.3887362120
GGTCGCC272950.07.387944120
AGTGTAG641700.07.362992118-119
GAGTGTA676700.07.3612127120
CGGTGGT363800.06.8606687118-119
TGTAGAT706000.06.732679120
CGTATCA190100.06.7245765120
Produced by FastQC (version 0.11.5)