FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14786021
Sequences flagged as poor quality0
Sequence length54-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG105150.011.583358120
AAAAAAA950950.010.151871120
TGGTCGC589350.08.63317120
CGTATCA384150.08.496612120
GGTGGTC692500.08.490906120
GTGGTCG642450.08.24649120
GGTCGCC574500.08.187923120
TCGGTGG807100.08.1178875120
CCGTATC447700.08.094641120
CGCCGTA478050.07.7564473120
AGATCTC1077600.07.689247120
GTCGCCG588400.07.6885843120
CTCGGTG855100.07.648166120
GCCGTAT468150.07.6385155120
CGGTGGT758300.07.6196136120
TCTCGGT904550.07.488746120
ATCTCGG978500.07.468514120
TCATTAA327600.07.4541516120
GATCTCG1043350.07.360845120
GTATCAT391350.07.1444416120
Produced by FastQC (version 0.11.5)