FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830836

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830836
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14727029
Sequences flagged as poor quality0
Sequence length126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG86200.09.404744120
TAGATCT361600.09.216904120
TCTCGGT284900.09.211057120
AGATCTC351400.09.211015120
ATCTCGG314150.09.079815120
GATCTCG348350.08.8779335120
AGTGTAG501100.08.712253120
GTAGATC483150.08.6257715120
GAGTGTA537500.08.6138315120
GTGTAGA487650.08.533859120
AGAGTGT585500.08.502528120
CTCGGTG282750.08.346615120
AAGAGTG652500.07.868756120
TGGTCGC186750.07.7495575120
TCGGTGG271200.07.6835203120
GTGGTCG205450.07.658004120
TAGGGAA924400.07.483642120
GGTGGTC232850.07.478977120
TGTAGGG1028400.07.3925138120
TGTAGAT534700.07.086628120
Produced by FastQC (version 0.11.5)