FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830848

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830848
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13269466
Sequences flagged as poor quality0
Sequence length77-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT286400.010.388131120
AGTGTAG414900.010.328834120
GTGTAGA403250.09.613699120
GAGTGTA454450.09.350579120
AGAGTGT500050.09.158973120
GTAGATC406150.09.145495120
AGATCTC285300.09.079892120
AAGAGTG563400.08.907889120
ATCTCGG267450.08.742028120
GATCTCG296300.08.621096120
GTGGTCG158400.08.385757120
TGTAGAT439950.08.347243120
GGTGGTC183950.08.070536120
TCGGTGG217600.07.899732120
GTGTAGG993900.07.855461120
TCTCGGT247450.07.8454933120
GGGAAAG784000.07.712357120
GTAGGGA850550.07.695436120
TAGGGAA809200.07.657871120
AAAGAGT652350.07.628776120
Produced by FastQC (version 0.11.5)