FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830854

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830854
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11552435
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT275050.08.964787120
GAGTGTA397450.08.55875120
AGATCTC278250.08.279532120
GTGGTCG166300.08.081008120
GCGTCGG57700.08.006167120
TGGTCGC151450.07.843424120
GTGTAGA367100.07.5666976120
AGTGTAG366200.07.5120583118-119
AGAGTGT435550.07.4794836120
AAGAGTG484000.07.462097120
CTCGGTG229400.07.453516120
GGTCGCC158750.07.4071665120
TCTCGGT234600.07.339452120
TGTAGAT400200.07.180723120
GTAGATC366700.07.0109663118-119
GATCTCG273450.06.998783120
TCGGTGG220800.06.9286866120
GGTGGTC187200.06.90684118-119
ATCTCGG253650.06.7650213118-119
GTAGGGA667050.06.6015735120
Produced by FastQC (version 0.11.5)