FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830856

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830856
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13864226
Sequences flagged as poor quality0
Sequence length72-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC258600.09.650893120
GTGGTCG285950.09.504096120
TCGGTGG381850.09.222486120
AGATCTC520050.08.928912120
ATCTCGG477250.08.900001120
TAGATCT541850.08.890766120
CTCGGTG414100.08.851944120
GGTGGTC313850.08.716565120
TCTCGGT440300.08.679475120
GATCTCG508500.08.388443120
GCGTCGG88350.08.352207120
GGTCGCC256450.08.328178120
GTGTAGA702800.08.066827120
CGGTGGT368050.07.987152120
AGTGTAG727750.07.9139214120
AGAGTGT845650.07.8463407120
TGTAGAT725450.07.7570763120
GTAGATC695350.07.7477493120
GAGTGTA778650.07.6585546120
AAGAGTG926700.07.613263120
Produced by FastQC (version 0.11.5)