FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830858

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830858
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12119772
Sequences flagged as poor quality0
Sequence length55-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTAGGG312150.09.782736120
TAGGGAA277550.09.68373120
AGTGTAG146600.09.494233120
GTAGGGA286250.09.158869120
CGTCGTG466550.09.142759120
GTGTAGG353700.08.955808120
TCGTGTA412100.08.778505120
CGTGTAG374300.08.735395120
GTCGTGT429600.08.700209120
GAGTGTA156750.08.534993120
AGCGTCG532800.08.433804120
GCGTCGT498500.08.400327120
GTAGATC161350.08.180119120
GAGCGTC584800.08.155783120
GTGTAGA155450.08.027467120
AAGAGTG214450.07.749249120
AGAGCGT653200.07.659947120
TAGATCT108350.07.4749923120
AGAGTGT183600.07.368511118-119
AAGAGCG686450.07.332616120
Produced by FastQC (version 0.11.5)