FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830860

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830860
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13737093
Sequences flagged as poor quality0
Sequence length69-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT430500.09.701721120
AGATCTC409350.09.015567120
GCGTCGG77950.08.853081120
GAGTGTA642850.08.821346120
GATCTCG400600.08.7930565120
TCTCGGT341450.08.717005120
TGGTCGC212750.08.715687120
AGTGTAG592950.08.713604120
GGTGGTC255000.08.707115120
ATCTCGG374050.08.502741120
GTGTAGA571000.08.396985120
AGAGTGT694800.08.351787120
GTAGATC572250.08.263293120
TCGGTGG308150.08.178993120
TGTAGAT619450.08.011465120
CTCGGTG328850.07.846633120
GTGGTCG231600.07.824942120
AAGAGTG769100.07.810233120
GGTCGCC222200.07.6698527120
CGGTGGT300400.07.6309066120
Produced by FastQC (version 0.11.5)