FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830864

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830864
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15260326
Sequences flagged as poor quality0
Sequence length58-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA968950.09.4754925120
CGTATCA349300.08.526656120
TGGTCGC529450.08.483446120
GGTCGCC522650.08.076813120
GTGGTCG574350.08.039802120
GGTGGTC614600.08.001788120
CGGTGGT685800.07.8452396120
TCGGTGG723050.07.58225120
CTCGGTG781200.07.5097933120
TCTCGGT822200.07.390923120
CGCCGTA467150.07.2753806120
GCCGTAT443250.07.2341614120
GTATCAT380800.07.190574120
GTCGCCG558450.07.0214133120
AGATCTC957800.07.015375120
TAGATCT987300.06.963892120
GATCTCG941600.06.9064946120
ATCTCGG879950.06.8558455118-119
CCGTATC424100.06.852874120
TCGCCGT538600.06.811935120
Produced by FastQC (version 0.11.5)