FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11818273
Sequences flagged as poor quality0
Sequence length58-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA749950.011.086765120
TCATTAA231600.08.081463120
CGTATCA297350.07.928637120
TGGTCGC436850.07.690058120
GTGGTCG474350.07.537396120
GGTCGCC429600.07.3729897120
GTATCAT308050.07.361131120
GGTGGTC506550.07.330646120
ATCATTA263650.07.0990586120
GTCGCCG484450.06.9220834120
TCGGTGG584200.06.9107866120
GCCGTAT390750.06.708978120
TATCATT333550.06.654489120
TAGATCT765700.06.643718120
CCGTATC365100.06.6216645120
AGATCTC744750.06.6211777120
CGGTGGT564200.06.5656514118-119
GATCTCG736400.06.5251822120
CATTAAA249700.06.5106554118-119
TCTCGGT662900.06.4613633120
Produced by FastQC (version 0.11.5)