FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15366294
Sequences flagged as poor quality0
Sequence length54-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT388900.09.02418120
ATCTCGG347300.08.75776120
TCTCGGT315400.08.7305355120
TGGTCGC194850.08.620798120
CTCGGTG312350.08.546895120
GTGGTCG211900.08.521684120
AGTGTAG530400.08.505586120
GGTGGTC256850.08.385033120
GTGTAGA519200.08.284654120
GCGTCGG63100.08.271414120
GTAGATC511900.08.238726120
GAGTGTA568850.08.088862120
AGAGTGT622350.07.8947625120
GATCTCG387050.07.81184120
AGATCTC392150.07.7331924118-119
TCGGTGG297100.07.612522120
GGTCGCC193150.07.6095896120
AAGAGTG689250.07.2938547120
TGTAGAT560600.07.020057120
TAGGGAA939950.07.001511120
Produced by FastQC (version 0.11.5)