FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17202469
Sequences flagged as poor quality0
Sequence length64-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA973750.012.196497120
GCGTCGG112700.011.235576120
GGTCGCC837050.010.66813120
CGTATCA491550.010.658187120
GCCGTAT614250.010.571067120
TGGTCGC891700.010.545981120
CGCCGTA661850.010.490847120
CCGTATC588800.010.049533120
GGTGGTC1069000.09.565962120
GTGGTCG978450.09.482167120
GTCGCCG818800.09.410745120
TCGCCGT772800.09.39626120
GTATCAT513600.09.172367120
CGGTGGT1190100.08.995974120
TCATTAA396950.08.965111120
CTCGGTG1370800.08.895828120
TCGGTGG1263900.08.807811120
ATCATTA467650.08.572201120
TATCATT559200.08.199039120
TCTCGGT1456750.08.185583120
Produced by FastQC (version 0.11.5)