FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830880

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830880
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11508583
Sequences flagged as poor quality0
Sequence length50-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT226200.09.07166120
GTAGATC327850.08.619836120
AGATCTC224800.08.514275120
AAGAGTG431850.08.475204120
AGAGTGT385550.08.434743120
GTGTAGA319950.08.401352120
GCGTCGG74150.08.334496120
GAGTGTA351150.08.133314120
AGTGTAG324500.08.061969118-119
GATCTCG242400.07.9208283120
CTCTAGA11755.8350615E-67.6596103120
TGTAGAT346550.07.6006703120
CTCGGTG201150.07.457156120
TAGGGAA610500.07.38087120
TCTCGGT202050.07.334852120
TGTAGGG673600.07.3307943120
GTGTAGG729400.07.23886120
CGTGTAG771200.07.1888304120
GTAGGGA633150.07.088662118-119
TCGGTGG195950.07.073265120
Produced by FastQC (version 0.11.5)