FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830890

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830890
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12290777
Sequences flagged as poor quality0
Sequence length60-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT320200.09.933768120
AGATCTC308200.09.56111120
TCGGTGG225050.09.493589120
TGGTCGC153500.09.383445120
ATCTCGG281750.09.3297415120
AGTGTAG446900.09.064688120
CTCGGTG243700.08.914819120
GTGGTCG167750.08.836777120
GAGTGTA481200.08.83013120
GTGTAGA437650.08.77632120
GGTGGTC190450.08.728874120
GATCTCG313600.08.53529120
TCTCGGT253500.08.508607118-119
AGAGTGT527000.08.506864120
GTAGATC445250.08.410855120
AAGAGTG580600.08.26937120
TGTAGAT472150.07.982504120
GGGAAAG823300.07.7269344120
CGGTGGT223100.07.559032120
TGTAGGG947900.07.5026608120
Produced by FastQC (version 0.11.5)