FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15582836
Sequences flagged as poor quality0
Sequence length70-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATCA318750.08.451578120
CCGTATC380900.08.31696120
AAAAAAA1159800.08.194336120
GTGGTCG552050.07.9990983120
GGTGGTC611500.07.957306120
TGGTCGC511800.07.889627120
GGTCGCC507750.07.798942120
GCCGTAT404700.07.5758157120
CGGTGGT673100.07.344958120
TCGGTGG689150.07.1606536118-119
TCTCGGT763050.07.0845695120
GTATCAT376750.07.070846120
CGCCGTA451200.06.9945264120
AGATCTC909100.06.8175817120
TAGATCT942400.06.7549453120
GCGTCGG111950.06.6456776120
ATCTCGG821450.06.639333120
CTCGGTG748300.06.622866120
GATCTCG901650.06.5678144120
GTCGCCG551300.06.442811120
Produced by FastQC (version 0.11.5)