FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16011284
Sequences flagged as poor quality0
Sequence length63-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG82000.012.367383120
AAAAAAA1133750.011.093764120
TGGTCGC696650.08.966873120
CGTATCA459600.08.499746120
GGTCGCC664950.08.320452120
GTGGTCG753900.08.270024120
GCCGTAT555800.08.119032120
GGTGGTC828250.08.10725120
CGCCGTA575900.08.096156120
GTCGCCG655950.07.9223156120
TCATTAA383400.07.8100424120
CGGTGGT922100.07.7116146120
GTATCAT486100.07.703071120
TCGGTGG966400.07.6002784120
TCTCGGT1072400.07.4533644120
CCGTATC535650.07.393801120
TCGCCGT643900.07.3809404120
CTCGGTG1022300.07.3549147120
ATCTCGG1150400.07.328792120
CGATCTA20206.348273E-107.1278585
Produced by FastQC (version 0.11.5)