FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830926

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830926
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16447236
Sequences flagged as poor quality0
Sequence length50-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG65450.013.8696165120
GGTCGCC475450.09.255575120
GTGGTCG548800.08.927723120
TGGTCGC504550.08.924314120
AAAAAAA921450.08.742391120
GTCGCCG470000.08.531495120
CGCCGTA409000.08.348765120
CGGTGGT678100.08.253784120
GGTGGTC597400.08.130989120
GCCGTAT409350.08.018535120
TCGCCGT453300.07.957245120
TCGGTGG703800.07.90968120
TAGATCT997050.07.832302120
CTCGGTG739100.07.8247247120
TCTCGGT785250.07.7859244120
GATCTCG911050.07.6808267120
ATCTCGG848400.07.5323377120
CCGTATC413050.07.437303120
CGTATCA350150.07.4366794118-119
AGATCTC955500.07.405305120
Produced by FastQC (version 0.11.5)