FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16932681
Sequences flagged as poor quality0
Sequence length64-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG78700.011.893519120
ATCTCGG511150.09.320359120
AGATCTC585400.09.163162120
GGTCGCC276400.09.030583120
GGTGGTC348000.08.948466120
TAGATCT596950.08.905458120
AGTGTAG808400.08.869561120
TGGTCGC284150.08.868745120
AGAGTGT941850.08.734061120
GTGGTCG303050.08.632423120
TCTCGGT467100.08.632169120
GTAGATC778500.08.578218120
GATCTCG552700.08.521984120
CTCGGTG427550.08.462349120
GAGTGTA868550.08.269131120
GTGTAGA788450.08.196003120
TCGGTGG412650.08.055425120
AAGAGTG1049900.07.703756120
CGGTGGT401450.07.66737120
TGTAGAT837350.07.38775120
Produced by FastQC (version 0.11.5)