FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830932

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830932
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16971584
Sequences flagged as poor quality0
Sequence length51-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG72850.014.907321120
AAAAAAA2479700.013.1507635120
TCTCGGG35550.011.308120
CCCCCCG4250.001073624411.2941
CGTATCA946700.08.891926120
GTCGCCG1378200.08.855014120
CCGTATC1038000.08.693627120
GGTCGCC1428350.08.552512120
ATCATTA880950.08.540766120
TCATTAA784350.08.514043120
GCCGTAT1118750.08.505909120
TGGTCGC1529600.08.461022120
GTATCAT954050.08.42093120
GTGGTCG1647450.08.416631120
CGCCGTA1182550.08.331136120
TCGCCGT1303850.08.264742120
CATTAAA782450.08.059288120
CGGTGGT1919900.07.900399120
GGTCCGG27750.07.7837031
GGTGGTC1767900.07.7651334120
Produced by FastQC (version 0.11.5)