FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830936

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830936
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14145268
Sequences flagged as poor quality0
Sequence length51-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG111850.09.226692120
TGGTCGC322300.08.731043120
GGTGGTC384800.08.076965120
TAGATCT590200.07.888893120
TCGGTGG452250.07.5224285120
AGATCTC576300.07.485724120
AAAAAAA607750.07.48338120
CGGTGGT440250.07.3322363120
ATCTCGG541550.07.3123827120
GTGGTCG357100.07.3089156120
TCTCGGT492050.07.267593120
CTCGGTG482350.07.252034120
CGTATCA220900.07.11638120
GGTCGCC328050.07.059937120
AAGAGTG925950.06.8232985120
GATCTCG577800.06.7913136120
AGAGTGT854650.06.7747393120
GTGTAGA744350.06.7549224120
GAGTGTA800350.06.7320905120
GTAGATC732750.06.714467120
Produced by FastQC (version 0.11.5)