FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14710023
Sequences flagged as poor quality0
Sequence length51-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG68550.011.817092120
AAAAAAA964650.011.053555120
GGTCGCC552500.09.035982120
CGCCGTA469100.08.685376120
TGGTCGC581450.08.617046120
CGTATCA392550.08.514214120
GCCGTAT461400.08.258106120
GTGGTCG625400.08.174591120
GGTGGTC680700.08.171622120
GTCGCCG535400.08.046933120
TCGCCGT519900.07.975218120
CGGTGGT767100.07.95524120
TCGGTGG800550.07.8327117120
CCGTATC455850.07.5030394120
CTCGGTG837350.07.434923118-119
ATCTCGG954500.07.3551955120
GTATCAT419350.07.311872120
AGATCTC1066700.07.217199120
TCTCGGT892550.07.2068677120
GATCTCG1011300.06.8708887120
Produced by FastQC (version 0.11.5)