FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11891884
Sequences flagged as poor quality0
Sequence length65-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1314600.015.092661120
CGTATCA624550.09.731225120
GCGTCGG70650.09.596028120
TCATTAA467600.09.443404120
GTATCAT605600.09.282801120
ATCATTA533250.09.03462120
CGCCGTA780850.08.697693120
GCCGTAT745250.08.589892120
CATTAAA457750.08.545638118-119
CCGTATC713300.08.2555118-119
TCGCCGT856900.08.212835120
ATTAAAA514800.08.15802120
GGTCGCC950500.08.136283120
TATCATT617350.08.046817120
GTCGCCG913000.08.017044120
GTGGTCG1064800.07.6742215120
TGGTCGC994400.07.668487120
TTAAAAA489950.07.6411386120
TCTCGGG29350.07.359015120
GGTGGTC1142750.07.266246120
Produced by FastQC (version 0.11.5)