FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830956

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830956
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13102378
Sequences flagged as poor quality0
Sequence length52-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT318350.08.632096120
AGTGTAG437250.08.233359120
GAGTGTA475200.07.9925056120
TGTAGAT444900.07.876007120
TCTCGGT289250.07.8617916120
GTAGATC430100.07.672712120
GATCTCG322650.07.66163120
AGATCTC313050.07.628252120
GTGTAGA432450.07.423692118-119
CTCGGTG285200.07.405405120
ATCTCGG318450.07.329325120
AGAGTGT511000.07.256434120
TCGGTGG267550.07.1987276120
AAGAGTG564800.07.16013120
GTGGTCG214350.07.1099396120
GGTGGTC229950.06.9668026120
TAGGGAA780900.06.9382195120
TGGTCGC193200.06.863424120
GTAGGGA816400.06.8202558120
GTGTAGG934700.06.8108106120
Produced by FastQC (version 0.11.5)