FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11350983
Sequences flagged as poor quality0
Sequence length70-126
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1801950.013.907888120
TCTCGGG17750.010.478588120
CGTATCA756350.010.23308120
CGCCGTA968900.010.093646120
CCGTATC833100.010.01053120
GCCGTAT903450.09.908415120
TCGCCGT1079000.09.858861120
GTCGCCG1157150.09.851523120
GGTCGCC1232450.09.770515120
GTATCAT732100.09.711525120
TCATTAA602150.09.704959120
ATCATTA673500.09.540944120
CATTAAA581950.09.299516120
TGGTCGC1333500.09.187602120
GTGGTCG1442000.09.049685120
GGTGGTC1555400.09.045658120
GGGTACT13307.021299E-109.0254921
GGGGCCA5350.00721462638.9748821
TATCATT774150.08.765505120
CGGTGGT1689850.08.620649120
Produced by FastQC (version 0.11.5)