FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11221451
Sequences flagged as poor quality0
Sequence length63-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG68700.08.995483120
GTGGTCG280150.08.67378120
TAGATCT493800.08.3838215120
GGTGGTC311050.08.352216120
AGTGTAG652650.08.227857120
TGGTCGC257300.08.114905120
GCCGTAT225300.08.069107120
GGTCGCC258150.08.041702120
TCGGTGG363000.07.933752120
GATCTCG480200.07.834106120
AAAAAAA475750.07.8064914120
TCTCGGT404500.07.7872615120
AGATCTC489550.07.721249120
ATCTCGG432200.07.7185206120
GAGTGTA697750.07.653044120
GTAGATC637750.07.4887033120
CTCGGTG390300.07.3941894120
GTGTAGA632550.07.34159120
GTCGCCG278650.07.299358120
AGAGTGT747950.07.1432314118-119
Produced by FastQC (version 0.11.5)