FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11615894
Sequences flagged as poor quality0
Sequence length55-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGTAG238350.09.16153120
TAGATCT170200.08.776504120
GTGGTCG109700.08.6403675120
AGATCTC173950.08.621787120
GAGTGTA257450.08.551748120
GTAGATC227950.08.263648120
GATCTCG179250.08.032187120
GTGTAGA239450.07.916879120
AGAGTGT285600.07.855886120
TAGGGAA450000.07.6921024120
AAGAGTG323350.07.680849120
GTAGGGA461700.07.536156120
TGTAGGG491000.07.2330585120
GTGTAGG535150.07.1632120
TCGGTGG148650.07.1027994120
CGTGTAG561400.07.0312943120
ATCTCGG183600.06.9269958120
TCTCGGT169850.06.922649120
TGTAGAT273200.06.916902120
GTCGTGT628500.06.815139120
Produced by FastQC (version 0.11.5)