FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830966

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830966
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12964495
Sequences flagged as poor quality0
Sequence length54-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAGGC5154.486236E-410.489453
GTGGTCG287050.09.88591120
TCGGTGG379650.08.928492120
GCGTCGG91150.08.6882105120
CTCGGTG426350.08.654099120
GGTGGTC319550.08.636386120
TCTCGGT434500.08.533196120
CGTATCA176150.08.412544120
AGATCTC525450.08.300726120
TGGTCGC264900.08.289191120
GATCTCG518350.08.26396120
TAGATCT541950.08.225127120
CGGTGGT368150.08.034061120
GTGTAGA703800.08.029984120
ATCTCGG472350.08.001837120
AGAGTGT828150.07.831226120
GGTCGCC266450.07.8131614120
AGTGTAG723050.07.641953120
GTAGATC701400.07.621229120
GAGTGTA770650.07.6136823120
Produced by FastQC (version 0.11.5)