FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16188411
Sequences flagged as poor quality0
Sequence length55-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1935600.014.013201120
GCGTCGG132650.010.194429120
CGTATCA842750.08.864618120
GTATCAT820400.08.86436120
TCATTAA658850.08.711731120
ATCATTA743500.08.6009865120
CCGTATC969200.08.235165120
CATTAAA637550.08.088364120
CGCCGTA1089850.08.040415120
TGGTCGC1356150.08.008258120
GCCGTAT1014200.08.000144120
GGTCGCC1309250.07.748854120
ATTAAAA731450.07.5841117120
TATCATT840600.07.5502644120
GGTGGTC1544050.07.5085917120
TCGCCGT1213900.07.2583632120
GTGGTCG1454200.07.20579118-119
GTCGCCG1296150.07.150176120
TCGGTGG1770600.07.0807858120
CGGTGGT1669050.07.0362763120
Produced by FastQC (version 0.11.5)