FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830990

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830990
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13023399
Sequences flagged as poor quality0
Sequence length62-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGTAG337650.09.46461120
GAGTGTA369200.08.948677120
TAGATCT238400.08.541838120
GTGTAGA334500.08.47625120
GTAGATC338600.08.28491120
AGATCTC236500.08.229466120
TAGGGAA649250.08.21597120
AGAGTGT404300.08.156924120
TGTAGGG727250.08.127728120
AAGAGTG456850.08.033881120
GTAGGGA677300.07.78702120
GATCTCG243100.07.7095222120
TGGTCGC138150.07.6962686120
GTGTAGG788500.07.397336120
TCGTGTA894100.07.3836217120
GGGAAAG643050.07.267628120
TCTCGGT226850.07.2555385120
GTCGTGT942050.07.2501063120
CGTGTAG838300.07.2445188120
ATCTCGG240950.07.179982120
Produced by FastQC (version 0.11.5)